STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI25832.1Cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein. (468 aa)    
Predicted Functional Partners:
CydB-3
Cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein.
 
 0.998
SEH45649.1
Cytochrome d ubiquinol oxidase subunit II.
 
 
 0.950
CydB-2
Cytochrome d ubiquinol oxidase subunit II.
 
 
 0.950
SEI18287.1
Cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein.
 
 
 0.950
CydB
Cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein.
 
 0.947
SEI25829.1
Hypothetical protein.
       0.664
SEH43039.1
Cyd operon protein YbgT.
  
 
 0.656
putA
L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
   
 
 0.600
SEI27824.1
L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
   
 
 0.577
SEI24967.1
NADH dehydrogenase subunit L.
    
 0.574
Your Current Organism:
Paraburkholderia hospita
NCBI taxonomy Id: 169430
Other names: Burkholderia hospita, Burkholderia hospita Goris et al. 2003, Burkholderia sp. LMG 20598, CCUG 43658, CCUG 43661, CIP 107793, DSM 17164, LMG 20598, LMG:20598, P. hospita, Paraburkholderia hospita (Goris et al. 2003) Sawana et al. 2015, strain Goris R-8366, strain R-8366
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