Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PrpD | SEH49182.1 | SAMN05192544_105641 | SAMN05192544_1002365 | 2-methylcitrate dehydratase. | 2-methylcitrate synthase. | 0.978 |
PrpD | SEI18243.1 | SAMN05192544_105641 | SAMN05192544_103164 | 2-methylcitrate dehydratase. | 2-methylcitrate dehydratase. | 0.925 |
PrpD | SEI25140.1 | SAMN05192544_105641 | SAMN05192544_105643 | 2-methylcitrate dehydratase. | 2-methylcitrate synthase; Belongs to the citrate synthase family. | 0.988 |
PrpD | SEI25859.1 | SAMN05192544_105641 | SAMN05192544_106313 | 2-methylcitrate dehydratase. | 2-Methylisocitrate lyase, PEP mutase family. | 0.849 |
SEH49182.1 | PrpD | SAMN05192544_1002365 | SAMN05192544_105641 | 2-methylcitrate synthase. | 2-methylcitrate dehydratase. | 0.978 |
SEH49182.1 | SEI18243.1 | SAMN05192544_1002365 | SAMN05192544_103164 | 2-methylcitrate synthase. | 2-methylcitrate dehydratase. | 0.956 |
SEH49182.1 | SEI25140.1 | SAMN05192544_1002365 | SAMN05192544_105643 | 2-methylcitrate synthase. | 2-methylcitrate synthase; Belongs to the citrate synthase family. | 0.900 |
SEH49182.1 | SEI25859.1 | SAMN05192544_1002365 | SAMN05192544_106313 | 2-methylcitrate synthase. | 2-Methylisocitrate lyase, PEP mutase family. | 0.801 |
SEI18243.1 | PrpD | SAMN05192544_103164 | SAMN05192544_105641 | 2-methylcitrate dehydratase. | 2-methylcitrate dehydratase. | 0.925 |
SEI18243.1 | SEH49182.1 | SAMN05192544_103164 | SAMN05192544_1002365 | 2-methylcitrate dehydratase. | 2-methylcitrate synthase. | 0.956 |
SEI18243.1 | SEI25140.1 | SAMN05192544_103164 | SAMN05192544_105643 | 2-methylcitrate dehydratase. | 2-methylcitrate synthase; Belongs to the citrate synthase family. | 0.956 |
SEI18243.1 | SEI25859.1 | SAMN05192544_103164 | SAMN05192544_106313 | 2-methylcitrate dehydratase. | 2-Methylisocitrate lyase, PEP mutase family. | 0.876 |
SEI25140.1 | PrpD | SAMN05192544_105643 | SAMN05192544_105641 | 2-methylcitrate synthase; Belongs to the citrate synthase family. | 2-methylcitrate dehydratase. | 0.988 |
SEI25140.1 | SEH49182.1 | SAMN05192544_105643 | SAMN05192544_1002365 | 2-methylcitrate synthase; Belongs to the citrate synthase family. | 2-methylcitrate synthase. | 0.900 |
SEI25140.1 | SEI18243.1 | SAMN05192544_105643 | SAMN05192544_103164 | 2-methylcitrate synthase; Belongs to the citrate synthase family. | 2-methylcitrate dehydratase. | 0.956 |
SEI25140.1 | SEI25859.1 | SAMN05192544_105643 | SAMN05192544_106313 | 2-methylcitrate synthase; Belongs to the citrate synthase family. | 2-Methylisocitrate lyase, PEP mutase family. | 0.802 |
SEI25844.1 | SEI25846.1 | SAMN05192544_10632 | SAMN05192544_10633 | GntR family transcriptional regulator. | Amino acid/amide ABC transporter substrate-binding protein, HAAT family. | 0.893 |
SEI25844.1 | SEI25848.1 | SAMN05192544_10632 | SAMN05192544_10635 | GntR family transcriptional regulator. | Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family. | 0.713 |
SEI25844.1 | SEI25854.1 | SAMN05192544_10632 | SAMN05192544_106310 | GntR family transcriptional regulator. | N-methylhydantoinase B. | 0.812 |
SEI25844.1 | SEI25855.1 | SAMN05192544_10632 | SAMN05192544_106311 | GntR family transcriptional regulator. | N-methylhydantoinase A. | 0.788 |
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