STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OxlT-4MFS transporter, OFA family, oxalate/formate antiporter. (439 aa)    
Predicted Functional Partners:
SEI25938.1
oxalyl-CoA decarboxylase; Belongs to the TPP enzyme family.
  
   
 0.680
frc
formyl-CoA transferase; Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl- CoA to oxalate; Belongs to the CoA-transferase III family. Frc subfamily.
  
     0.673
Frc
formyl-CoA transferase; Belongs to the CoA-transferase III family.
  
     0.671
Frc-2
formyl-CoA transferase; Belongs to the CoA-transferase III family.
  
     0.670
SEI23307.1
Respiratory nitrate reductase alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  
 0.625
NarH
Respiratory nitrate reductase beta subunit.
  
  
 0.515
NarJ
Respiratory nitrate reductase chaperone NarJ.
  
  
 0.515
SEI26471.1
Transcriptional regulator, GntR family.
  
     0.458
SEI25931.1
Transcriptional regulator, GntR family.
  
     0.447
NarI
Respiratory nitrate reductase gamma subunit.
  
  
 0.436
Your Current Organism:
Paraburkholderia hospita
NCBI taxonomy Id: 169430
Other names: Burkholderia hospita, Burkholderia hospita Goris et al. 2003, Burkholderia sp. LMG 20598, CCUG 43658, CCUG 43661, CIP 107793, DSM 17164, LMG 20598, LMG:20598, P. hospita, Paraburkholderia hospita (Goris et al. 2003) Sawana et al. 2015, strain Goris R-8366, strain R-8366
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