STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI26111.13-oxoacyl-[acyl-carrier protein] reductase. (252 aa)    
Predicted Functional Partners:
SEI27586.1
2-keto-3-deoxy-L-fuconate dehydrogenase.
  
  
 
0.922
SEH49289.1
Ureidoglycolate lyase/2,4-diketo-3-deoxy-L-fuconate hydrolase.
   
  0.909
SEI27528.1
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway).
   
  0.909
SEI18834.1
L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
    
  0.900
rhmD
L-rhamnonate dehydratase; Catalyzes the dehydration of L-rhamnonate to 2-keto-3-deoxy- L-rhamnonate (KDR).
    
  0.900
SEI26110.1
ChrR Cupin-like domain-containing protein.
       0.773
SEH84620.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
     0.763
SEI24160.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG.
  
     0.693
SEI25909.1
Enoyl-(Acyl carrier protein) reductase.
  
     0.661
SEI26114.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
    
0.625
Your Current Organism:
Paraburkholderia hospita
NCBI taxonomy Id: 169430
Other names: Burkholderia hospita, Burkholderia hospita Goris et al. 2003, Burkholderia sp. LMG 20598, CCUG 43658, CCUG 43661, CIP 107793, DSM 17164, LMG 20598, LMG:20598, P. hospita, Paraburkholderia hospita (Goris et al. 2003) Sawana et al. 2015, strain Goris R-8366, strain R-8366
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