Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEI26220.1 | SEI26222.1 | SAMN05192544_106743 | SAMN05192544_106744 | Hypothetical protein. | GreA/GreB family elongation factor. | 0.615 |
SEI26220.1 | SEI26224.1 | SAMN05192544_106743 | SAMN05192544_106745 | Hypothetical protein. | Hypothetical protein. | 0.615 |
SEI26220.1 | SEI26225.1 | SAMN05192544_106743 | SAMN05192544_106746 | Hypothetical protein. | Hypothetical protein. | 0.465 |
SEI26222.1 | SEI26220.1 | SAMN05192544_106744 | SAMN05192544_106743 | GreA/GreB family elongation factor. | Hypothetical protein. | 0.615 |
SEI26222.1 | SEI26224.1 | SAMN05192544_106744 | SAMN05192544_106745 | GreA/GreB family elongation factor. | Hypothetical protein. | 0.773 |
SEI26222.1 | SEI26225.1 | SAMN05192544_106744 | SAMN05192544_106746 | GreA/GreB family elongation factor. | Hypothetical protein. | 0.574 |
SEI26222.1 | pnp | SAMN05192544_106744 | SAMN05192544_105521 | GreA/GreB family elongation factor. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.525 |
SEI26222.1 | rpoA | SAMN05192544_106744 | SAMN05192544_103230 | GreA/GreB family elongation factor. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.722 |
SEI26222.1 | rpoB | SAMN05192544_106744 | SAMN05192544_11149 | GreA/GreB family elongation factor. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.720 |
SEI26222.1 | rpoC | SAMN05192544_106744 | SAMN05192544_111410 | GreA/GreB family elongation factor. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.790 |
SEI26222.1 | rpoZ | SAMN05192544_106744 | SAMN05192544_105046 | GreA/GreB family elongation factor. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.717 |
SEI26222.1 | rpsD | SAMN05192544_106744 | SAMN05192544_103229 | GreA/GreB family elongation factor. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.445 |
SEI26222.1 | rpsO | SAMN05192544_106744 | SAMN05192544_105520 | GreA/GreB family elongation factor. | SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.572 |
SEI26224.1 | SEI26220.1 | SAMN05192544_106745 | SAMN05192544_106743 | Hypothetical protein. | Hypothetical protein. | 0.615 |
SEI26224.1 | SEI26222.1 | SAMN05192544_106745 | SAMN05192544_106744 | Hypothetical protein. | GreA/GreB family elongation factor. | 0.773 |
SEI26224.1 | SEI26225.1 | SAMN05192544_106745 | SAMN05192544_106746 | Hypothetical protein. | Hypothetical protein. | 0.574 |
SEI26225.1 | SEI26220.1 | SAMN05192544_106746 | SAMN05192544_106743 | Hypothetical protein. | Hypothetical protein. | 0.465 |
SEI26225.1 | SEI26222.1 | SAMN05192544_106746 | SAMN05192544_106744 | Hypothetical protein. | GreA/GreB family elongation factor. | 0.574 |
SEI26225.1 | SEI26224.1 | SAMN05192544_106746 | SAMN05192544_106745 | Hypothetical protein. | Hypothetical protein. | 0.574 |
pnp | SEI26222.1 | SAMN05192544_105521 | SAMN05192544_106744 | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | GreA/GreB family elongation factor. | 0.525 |
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