STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI26396.13-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (440 aa)    
Predicted Functional Partners:
SEI26389.1
acyl-CoA dehydrogenase.
 
 0.971
SEH80870.1
Short chain enoyl-CoA hydratase.
 0.966
SEH86294.1
3-hydroxyacyl-CoA dehydrogenase.
 
 0.962
SEI07559.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.962
SEI11577.1
Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.962
SEI16917.1
acetoacetyl-CoA synthetase.
  
 
 0.942
SEH41825.1
Hypothetical protein.
  
 0.936
SEH88144.1
3-oxoacid CoA-transferase subunit B.
  
 
 0.923
glcB
Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
   
 
 0.922
SEI04398.1
Malate synthase; Belongs to the malate synthase family.
   
 
 0.922
Your Current Organism:
Paraburkholderia hospita
NCBI taxonomy Id: 169430
Other names: Burkholderia hospita, Burkholderia hospita Goris et al. 2003, Burkholderia sp. LMG 20598, CCUG 43658, CCUG 43661, CIP 107793, DSM 17164, LMG 20598, LMG:20598, P. hospita, Paraburkholderia hospita (Goris et al. 2003) Sawana et al. 2015, strain Goris R-8366, strain R-8366
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