Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LpdA | SEI26698.1 | SAMN05192544_1011209 | SAMN05192544_10754 | Dihydrolipoamide dehydrogenase. | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | 0.848 |
LpdA | gcvH | SAMN05192544_1011209 | SAMN05192544_100143 | Dihydrolipoamide dehydrogenase. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.998 |
LpdA | gcvP | SAMN05192544_1011209 | SAMN05192544_100144 | Dihydrolipoamide dehydrogenase. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.982 |
SEI09626.1 | SEI09635.1 | SAMN05192544_1020112 | SAMN05192544_1020113 | N-methylglutamate dehydrogenase subunit B. | N-methylglutamate dehydrogenase subunit A precursor. | 0.956 |
SEI09626.1 | SEI26697.1 | SAMN05192544_1020112 | SAMN05192544_10753 | N-methylglutamate dehydrogenase subunit B. | Sarcosine oxidase subunit gamma. | 0.973 |
SEI09626.1 | SEI26698.1 | SAMN05192544_1020112 | SAMN05192544_10754 | N-methylglutamate dehydrogenase subunit B. | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | 0.991 |
SEI09626.1 | SEI26701.1 | SAMN05192544_1020112 | SAMN05192544_10756 | N-methylglutamate dehydrogenase subunit B. | Sarcosine oxidase subunit beta. | 0.828 |
SEI09626.1 | SEI27435.1 | SAMN05192544_1020112 | SAMN05192544_108820 | N-methylglutamate dehydrogenase subunit B. | Creatinase. | 0.913 |
SEI09626.1 | gcvP | SAMN05192544_1020112 | SAMN05192544_100144 | N-methylglutamate dehydrogenase subunit B. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.907 |
SEI09626.1 | kbl | SAMN05192544_1020112 | SAMN05192544_1003164 | N-methylglutamate dehydrogenase subunit B. | 2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. | 0.900 |
SEI09635.1 | SEI09626.1 | SAMN05192544_1020113 | SAMN05192544_1020112 | N-methylglutamate dehydrogenase subunit A precursor. | N-methylglutamate dehydrogenase subunit B. | 0.956 |
SEI09635.1 | SEI26697.1 | SAMN05192544_1020113 | SAMN05192544_10753 | N-methylglutamate dehydrogenase subunit A precursor. | Sarcosine oxidase subunit gamma. | 0.828 |
SEI09635.1 | SEI26698.1 | SAMN05192544_1020113 | SAMN05192544_10754 | N-methylglutamate dehydrogenase subunit A precursor. | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | 0.929 |
SEI09635.1 | SEI26699.1 | SAMN05192544_1020113 | SAMN05192544_10755 | N-methylglutamate dehydrogenase subunit A precursor. | Sarcosine oxidase subunit delta. | 0.849 |
SEI09635.1 | SEI27435.1 | SAMN05192544_1020113 | SAMN05192544_108820 | N-methylglutamate dehydrogenase subunit A precursor. | Creatinase. | 0.938 |
SEI09635.1 | gcvP | SAMN05192544_1020113 | SAMN05192544_100144 | N-methylglutamate dehydrogenase subunit A precursor. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.912 |
SEI09635.1 | kbl | SAMN05192544_1020113 | SAMN05192544_1003164 | N-methylglutamate dehydrogenase subunit A precursor. | 2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. | 0.906 |
SEI26697.1 | SEI09626.1 | SAMN05192544_10753 | SAMN05192544_1020112 | Sarcosine oxidase subunit gamma. | N-methylglutamate dehydrogenase subunit B. | 0.973 |
SEI26697.1 | SEI09635.1 | SAMN05192544_10753 | SAMN05192544_1020113 | Sarcosine oxidase subunit gamma. | N-methylglutamate dehydrogenase subunit A precursor. | 0.828 |
SEI26697.1 | SEI26698.1 | SAMN05192544_10753 | SAMN05192544_10754 | Sarcosine oxidase subunit gamma. | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | 0.998 |
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