STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI26804.1Rubredoxin; Belongs to the rubredoxin family. (140 aa)    
Predicted Functional Partners:
SEI01115.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit.
 
 
 0.682
SEI15537.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit.
 
 
 0.682
SEI17407.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit.
 
 
 0.676
SEH95409.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit.
 
 
 0.674
SEI11671.1
Pyridine nucleotide-disulfide oxidoreductase; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit/anthranilate 1,2-dioxygenase ferredoxin reductase subunit.
 
 
 0.673
SEH73309.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit.
 
 
 0.672
SEH52305.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit.
 
 
 0.670
SEI01187.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit.
 
 
 0.668
SEI22190.1
Reductase C-terminal.
  
 
 0.628
SEI28144.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
  
 
 0.628
Your Current Organism:
Paraburkholderia hospita
NCBI taxonomy Id: 169430
Other names: Burkholderia hospita, Burkholderia hospita Goris et al. 2003, Burkholderia sp. LMG 20598, CCUG 43658, CCUG 43661, CIP 107793, DSM 17164, LMG 20598, LMG:20598, P. hospita, Paraburkholderia hospita (Goris et al. 2003) Sawana et al. 2015, strain Goris R-8366, strain R-8366
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.