Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEI21274.1 | SEI27137.1 | SAMN05192544_103956 | SAMN05192544_108230 | Hypothetical protein. | Predicted arabinose efflux permease, MFS family. | 0.420 |
SEI27131.1 | SEI27132.1 | SAMN05192544_108226 | SAMN05192544_108227 | Hypothetical protein. | Chromate transporter. | 0.953 |
SEI27131.1 | SEI27134.1 | SAMN05192544_108226 | SAMN05192544_108228 | Hypothetical protein. | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.645 |
SEI27131.1 | SEI27136.1 | SAMN05192544_108226 | SAMN05192544_108229 | Hypothetical protein. | Hypothetical protein. | 0.705 |
SEI27131.1 | SEI27137.1 | SAMN05192544_108226 | SAMN05192544_108230 | Hypothetical protein. | Predicted arabinose efflux permease, MFS family. | 0.666 |
SEI27131.1 | SEI27138.1 | SAMN05192544_108226 | SAMN05192544_108231 | Hypothetical protein. | 40-residue YVTN family beta-propeller repeat-containing protein. | 0.537 |
SEI27132.1 | SEI27131.1 | SAMN05192544_108227 | SAMN05192544_108226 | Chromate transporter. | Hypothetical protein. | 0.953 |
SEI27132.1 | SEI27134.1 | SAMN05192544_108227 | SAMN05192544_108228 | Chromate transporter. | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.559 |
SEI27132.1 | SEI27136.1 | SAMN05192544_108227 | SAMN05192544_108229 | Chromate transporter. | Hypothetical protein. | 0.893 |
SEI27132.1 | SEI27137.1 | SAMN05192544_108227 | SAMN05192544_108230 | Chromate transporter. | Predicted arabinose efflux permease, MFS family. | 0.626 |
SEI27132.1 | SEI27138.1 | SAMN05192544_108227 | SAMN05192544_108231 | Chromate transporter. | 40-residue YVTN family beta-propeller repeat-containing protein. | 0.619 |
SEI27134.1 | SEI27131.1 | SAMN05192544_108228 | SAMN05192544_108226 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Hypothetical protein. | 0.645 |
SEI27134.1 | SEI27132.1 | SAMN05192544_108228 | SAMN05192544_108227 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Chromate transporter. | 0.559 |
SEI27134.1 | SEI27136.1 | SAMN05192544_108228 | SAMN05192544_108229 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Hypothetical protein. | 0.818 |
SEI27134.1 | SEI27137.1 | SAMN05192544_108228 | SAMN05192544_108230 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Predicted arabinose efflux permease, MFS family. | 0.780 |
SEI27134.1 | SEI27138.1 | SAMN05192544_108228 | SAMN05192544_108231 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 40-residue YVTN family beta-propeller repeat-containing protein. | 0.780 |
SEI27136.1 | SEI27131.1 | SAMN05192544_108229 | SAMN05192544_108226 | Hypothetical protein. | Hypothetical protein. | 0.705 |
SEI27136.1 | SEI27132.1 | SAMN05192544_108229 | SAMN05192544_108227 | Hypothetical protein. | Chromate transporter. | 0.893 |
SEI27136.1 | SEI27134.1 | SAMN05192544_108229 | SAMN05192544_108228 | Hypothetical protein. | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.818 |
SEI27136.1 | SEI27137.1 | SAMN05192544_108229 | SAMN05192544_108230 | Hypothetical protein. | Predicted arabinose efflux permease, MFS family. | 0.794 |
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