STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI27200.1Cytochrome P450. (929 aa)    
Predicted Functional Partners:
BenB
Benzoate/toluate 1,2-dioxygenase beta subunit.
 
 
 0.988
benD
Dihydroxycyclohexadiene carboxylate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 0.986
SEI24460.1
Benzoate 1,2-dioxygenase, alpha subunit.
 
 
 0.983
SEI24456.1
Benzoate/toluate 1,2-dioxygenase reductase subunit.
 
 
0.940
SEH88416.1
benzoate-CoA ligase.
  
 
 0.920
SEH84855.1
Benzaldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
  
 0.913
fadH
2,4-dienoyl-CoA reductase.
  
 0.904
SEI09348.1
Trimethylamine dehydrogenase apoprotein.
  
 0.904
SEI15551.1
3-phenylpropionate/cinnamic acid dioxygenase, small subunit.
 
  
 0.890
CatC
Muconolactone delta-isomerase.
 
  
 0.888
Your Current Organism:
Paraburkholderia hospita
NCBI taxonomy Id: 169430
Other names: Burkholderia hospita, Burkholderia hospita Goris et al. 2003, Burkholderia sp. LMG 20598, CCUG 43658, CCUG 43661, CIP 107793, DSM 17164, LMG 20598, LMG:20598, P. hospita, Paraburkholderia hospita (Goris et al. 2003) Sawana et al. 2015, strain Goris R-8366, strain R-8366
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