Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH41972.1 | SEI27382.1 | SAMN05192544_1001378 | SAMN05192544_108716 | Cell division protein FtsN. | N-acetylmuramoyl-L-alanine amidase. | 0.705 |
SEH41972.1 | lolA | SAMN05192544_1001378 | SAMN05192544_1024114 | Cell division protein FtsN. | Outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.420 |
SEH41972.1 | queG | SAMN05192544_1001378 | SAMN05192544_108718 | Cell division protein FtsN. | Epoxyqueuosine reductase; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family. | 0.404 |
SEH69788.1 | SEI27382.1 | SAMN05192544_1006129 | SAMN05192544_108716 | Hypothetical protein. | N-acetylmuramoyl-L-alanine amidase. | 0.612 |
SEH80986.1 | SEI27382.1 | SAMN05192544_100966 | SAMN05192544_108716 | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region. | N-acetylmuramoyl-L-alanine amidase. | 0.651 |
SEH80986.1 | SEI27383.1 | SAMN05192544_100966 | SAMN05192544_108717 | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | 0.789 |
SEI23936.1 | SEI27382.1 | SAMN05192544_105011 | SAMN05192544_108716 | Outer membrane lipoprotein-sorting protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | N-acetylmuramoyl-L-alanine amidase. | 0.640 |
SEI25057.1 | SEI27382.1 | SAMN05192544_10563 | SAMN05192544_108716 | Lipoprotein NlpD. | N-acetylmuramoyl-L-alanine amidase. | 0.572 |
SEI25983.1 | SEI27382.1 | SAMN05192544_106445 | SAMN05192544_108716 | Lipoprotein NlpD. | N-acetylmuramoyl-L-alanine amidase. | 0.598 |
SEI27382.1 | SEH41972.1 | SAMN05192544_108716 | SAMN05192544_1001378 | N-acetylmuramoyl-L-alanine amidase. | Cell division protein FtsN. | 0.705 |
SEI27382.1 | SEH69788.1 | SAMN05192544_108716 | SAMN05192544_1006129 | N-acetylmuramoyl-L-alanine amidase. | Hypothetical protein. | 0.612 |
SEI27382.1 | SEH80986.1 | SAMN05192544_108716 | SAMN05192544_100966 | N-acetylmuramoyl-L-alanine amidase. | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region. | 0.651 |
SEI27382.1 | SEI23936.1 | SAMN05192544_108716 | SAMN05192544_105011 | N-acetylmuramoyl-L-alanine amidase. | Outer membrane lipoprotein-sorting protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.640 |
SEI27382.1 | SEI25057.1 | SAMN05192544_108716 | SAMN05192544_10563 | N-acetylmuramoyl-L-alanine amidase. | Lipoprotein NlpD. | 0.572 |
SEI27382.1 | SEI25983.1 | SAMN05192544_108716 | SAMN05192544_106445 | N-acetylmuramoyl-L-alanine amidase. | Lipoprotein NlpD. | 0.598 |
SEI27382.1 | SEI27383.1 | SAMN05192544_108716 | SAMN05192544_108717 | N-acetylmuramoyl-L-alanine amidase. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | 0.882 |
SEI27382.1 | folE2 | SAMN05192544_108716 | SAMN05192544_109411 | N-acetylmuramoyl-L-alanine amidase. | GTP cyclohydrolase I; Converts GTP to 7,8-dihydroneopterin triphosphate. | 0.680 |
SEI27382.1 | lolA | SAMN05192544_108716 | SAMN05192544_1024114 | N-acetylmuramoyl-L-alanine amidase. | Outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.683 |
SEI27382.1 | queG | SAMN05192544_108716 | SAMN05192544_108718 | N-acetylmuramoyl-L-alanine amidase. | Epoxyqueuosine reductase; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family. | 0.673 |
SEI27383.1 | SEH80986.1 | SAMN05192544_108717 | SAMN05192544_100966 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region. | 0.789 |
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