STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FdxH-2Formate dehydrogenase (quinone-dependent) iron-sulfur subunit. (312 aa)    
Predicted Functional Partners:
SEH68085.1
Formate dehydrogenase subunit gamma.
 
 0.993
SEI28161.1
Formate dehydrogenase subunit gamma.
 
 
 0.984
FdnG
Formate dehydrogenase (quinone-dependent) catalytic subunit.
 
  
 0.967
SEI28158.1
Formate dehydrogenase (quinone-dependent) catalytic subunit.
 
 
 0.965
fdhE
FdhE protein; Necessary for formate dehydrogenase activity. Belongs to the FdhE family.
 
  
 0.932
SEH68144.1
Formate dehydrogenase (quinone-dependent) catalytic subunit.
 
 
 0.914
FdhA
Glutathione-independent formaldehyde dehydrogenase.
     
 0.901
FghA
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
     
  0.900
SEI26812.1
Acetamidase/formamidase.
     
  0.900
kynB
Kynurenine formamidase; Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation.
     
  0.900
Your Current Organism:
Paraburkholderia hospita
NCBI taxonomy Id: 169430
Other names: Burkholderia hospita, Burkholderia hospita Goris et al. 2003, Burkholderia sp. LMG 20598, CCUG 43658, CCUG 43661, CIP 107793, DSM 17164, LMG 20598, LMG:20598, P. hospita, Paraburkholderia hospita (Goris et al. 2003) Sawana et al. 2015, strain Goris R-8366, strain R-8366
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