STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUP18779.1Uncharacterised protein. (505 aa)    
Predicted Functional Partners:
glgB
1%2C4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.890
CUP74082.1
Uncharacterized conserved protein.
   
 
 0.873
glf
UDP-galactopyranose mutase.
  
 
 0.858
CUP18797.1
Glycosyl transferase family 2.
    
 0.857
glgC_1
Glucose-1-phosphate adenylyltransferase.
  
 0.849
CUP18627.1
Polysaccharide biosynthesis protein.
  
 
 0.756
CUP18716.1
Uncharacterized protein conserved in bacteria.
  
 
 0.746
CUP18752.1
Uncharacterised protein.
       0.701
tuaD
UDP-glucose 6-dehydrogenase tuaD.
  
 
 0.671
paaK_1
Phenylacetate-coenzyme A ligase.
       0.668
Your Current Organism:
Anaerotruncus colihominis
NCBI taxonomy Id: 169435
Other names: A. colihominis, Anaerotruncus colihominis Lawson et al. 2004, CCUG 45055, CIP 107754, DSM 17241, JCM 15631, Ruminococcus sp. 14565, WAL 14565
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.