STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adhBAlcohol dehydrogenase 2. (399 aa)    
Predicted Functional Partners:
porA_3
Pyruvate synthase subunit porA.
  
 
 0.923
preA_2
NAD-dependent dihydropyrimidine dehydrogenase subunit PreA.
  
 
 0.849
gldA
Glycerol dehydrogenase.
  
 
 0.811
CUP20277.1
Acyl-CoA dehydrogenase%2C short-chain specific.
  
 
 0.799
nqo1
NADH-quinone oxidoreductase subunit 1.
  
 
 0.792
CUP53420.1
NADH dehydrogenase subunit E.
  
 
 0.781
gabD_1
Succinate-semialdehyde dehydrogenase [NADP(+)] GabD.
 
 
 0.781
gabD_2
Succinate-semialdehyde dehydrogenase [NADP(+)] GabD.
 
 
 0.759
gltD_1
Glutamate synthase [NADPH] small chain.
    
 0.754
CUP19671.1
Uncharacterised protein.
       0.701
Your Current Organism:
Anaerotruncus colihominis
NCBI taxonomy Id: 169435
Other names: A. colihominis, Anaerotruncus colihominis Lawson et al. 2004, CCUG 45055, CIP 107754, DSM 17241, JCM 15631, Ruminococcus sp. 14565, WAL 14565
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.