Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CUP22251.1 | CUP72712.1 | ERS852551_00137 | ERS852551_01749 | RNA polymerase sigma factor. | RNA polymerase sigma factor%2C sigma-70 family. | 0.773 |
| CUP22251.1 | cheV | ERS852551_00137 | ERS852551_01105 | RNA polymerase sigma factor. | Chemotaxis protein CheV. | 0.826 |
| CUP22251.1 | flgB | ERS852551_00137 | ERS852551_01030 | RNA polymerase sigma factor. | Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. | 0.783 |
| CUP22251.1 | flgC | ERS852551_00137 | ERS852551_01031 | RNA polymerase sigma factor. | Putative proximal rod protein; Belongs to the flagella basal body rod proteins family. | 0.794 |
| CUP22251.1 | flgD | ERS852551_00137 | ERS852551_01040 | RNA polymerase sigma factor. | Basal-body rod modification protein flgD; Required for flagellar hook formation. May act as a scaffolding protein. | 0.759 |
| CUP22251.1 | flgK | ERS852551_00137 | ERS852551_01019 | RNA polymerase sigma factor. | Flagellar hook-associated protein 1. | 0.751 |
| CUP22251.1 | fliM | ERS852551_00137 | ERS852551_01046 | RNA polymerase sigma factor. | Flagellar motor switch protein FliM. | 0.738 |
| CUP22251.1 | fliN | ERS852551_00137 | ERS852551_01047 | RNA polymerase sigma factor. | Flagellar motor switch protein FliN. | 0.839 |
| CUP22251.1 | rpoB | ERS852551_00137 | ERS852551_00501 | RNA polymerase sigma factor. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.879 |
| CUP22251.1 | rpoC | ERS852551_00137 | ERS852551_00500 | RNA polymerase sigma factor. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.878 |
| CUP72712.1 | CUP22251.1 | ERS852551_01749 | ERS852551_00137 | RNA polymerase sigma factor%2C sigma-70 family. | RNA polymerase sigma factor. | 0.773 |
| CUP72712.1 | cheV | ERS852551_01749 | ERS852551_01105 | RNA polymerase sigma factor%2C sigma-70 family. | Chemotaxis protein CheV. | 0.804 |
| CUP72712.1 | flgB | ERS852551_01749 | ERS852551_01030 | RNA polymerase sigma factor%2C sigma-70 family. | Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. | 0.783 |
| CUP72712.1 | flgC | ERS852551_01749 | ERS852551_01031 | RNA polymerase sigma factor%2C sigma-70 family. | Putative proximal rod protein; Belongs to the flagella basal body rod proteins family. | 0.794 |
| CUP72712.1 | flgD | ERS852551_01749 | ERS852551_01040 | RNA polymerase sigma factor%2C sigma-70 family. | Basal-body rod modification protein flgD; Required for flagellar hook formation. May act as a scaffolding protein. | 0.759 |
| CUP72712.1 | flgK | ERS852551_01749 | ERS852551_01019 | RNA polymerase sigma factor%2C sigma-70 family. | Flagellar hook-associated protein 1. | 0.751 |
| CUP72712.1 | fliM | ERS852551_01749 | ERS852551_01046 | RNA polymerase sigma factor%2C sigma-70 family. | Flagellar motor switch protein FliM. | 0.738 |
| CUP72712.1 | fliN | ERS852551_01749 | ERS852551_01047 | RNA polymerase sigma factor%2C sigma-70 family. | Flagellar motor switch protein FliN. | 0.839 |
| CUP72712.1 | rpoB | ERS852551_01749 | ERS852551_00501 | RNA polymerase sigma factor%2C sigma-70 family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.879 |
| CUP72712.1 | rpoC | ERS852551_01749 | ERS852551_00500 | RNA polymerase sigma factor%2C sigma-70 family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.878 |
page 1 of 5