STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUP25203.1Uncharacterised protein. (56 aa)    
Predicted Functional Partners:
CUP25232.1
Uncharacterised protein.
       0.773
CUP25086.1
Zonular occludens toxin (Zot).
       0.746
CUP25109.1
Uncharacterised protein.
       0.746
CUP25143.1
Uncharacterised protein.
       0.746
CUP25175.1
Uncharacterised protein.
       0.746
CUP25264.1
Uncharacterised protein.
       0.655
CUP25296.1
Uncharacterised protein.
       0.645
CUP25322.1
Uncharacterised protein.
       0.645
CUP25348.1
Uncharacterised protein.
       0.497
CUP25373.1
Uncharacterised protein.
       0.421
Your Current Organism:
Anaerotruncus colihominis
NCBI taxonomy Id: 169435
Other names: A. colihominis, Anaerotruncus colihominis Lawson et al. 2004, CCUG 45055, CIP 107754, DSM 17241, JCM 15631, Ruminococcus sp. 14565, WAL 14565
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.