STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glgC_1Glucose-1-phosphate adenylyltransferase. (772 aa)    
Predicted Functional Partners:
CUQ00006.1
Translation initiation factor IF-2B subunit delta; Belongs to the eIF-2B alpha/beta/delta subunits family.
   
 0.992
selB
SelB translation factor.
    
 0.990
sunS_2
SPBc2 prophage-derived glycosyltransferase SunS.
  
 0.977
gmuF
Probable mannose-6-phosphate isomerase gmuF.
  
 0.966
CUP66459.1
Predicted hydrolase (HAD superfamily).
  
 0.951
glgB
1%2C4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 
 0.932
pgiB
Glucose-6-phosphate isomerase B; Belongs to the GPI family.
  
 0.907
rfbB
dTDP-glucose 4%2C6-dehydratase.
 
 0.902
rffG
dTDP-glucose 4%2C6-dehydratase 2.
 
 0.902
rfbG
CDP-glucose 4%2C6-dehydratase.
  
 0.887
Your Current Organism:
Anaerotruncus colihominis
NCBI taxonomy Id: 169435
Other names: A. colihominis, Anaerotruncus colihominis Lawson et al. 2004, CCUG 45055, CIP 107754, DSM 17241, JCM 15631, Ruminococcus sp. 14565, WAL 14565
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