STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gfoGlucose--fructose oxidoreductase precursor. (365 aa)    
Predicted Functional Partners:
tuaD
UDP-glucose 6-dehydrogenase tuaD.
 
 
 0.888
arnB
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase.
 
 
 0.882
CUP43000.1
Uncharacterized membrane protein.
       0.697
suhB
Inositol-1-monophosphatase.
    
 0.691
ydjH_1
Uncharacterized sugar kinase ydjH.
 
 
  0.651
gabD_1
Succinate-semialdehyde dehydrogenase [NADP(+)] GabD.
   
 
 0.635
gabD_2
Succinate-semialdehyde dehydrogenase [NADP(+)] GabD.
   
 
 0.635
CUP57662.1
Fructoselysine 3-epimerase.
 
 
 0.628
rbsC_6
Ribose transport system permease protein rbsC; Belongs to the binding-protein-dependent transport system permease family.
  
    0.615
CUP58179.1
Fructoselysine 3-epimerase.
  
 
  0.615
Your Current Organism:
Anaerotruncus colihominis
NCBI taxonomy Id: 169435
Other names: A. colihominis, Anaerotruncus colihominis Lawson et al. 2004, CCUG 45055, CIP 107754, DSM 17241, JCM 15631, Ruminococcus sp. 14565, WAL 14565
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