STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pleCNon-motile and phage-resistance protein. (183 aa)    
Predicted Functional Partners:
barA_1
Signal transduction histidine-protein kinase BarA.
  
 0.990
barA_2
Signal transduction histidine-protein kinase BarA.
   
 0.965
CUP44040.1
Shethna protein I.
 
   
 0.947
nqo2
NADH-quinone oxidoreductase subunit 2.
     
 0.852
rsbT
Serine/threonine-protein kinase rsbT.
 
  
 0.839
CUP93103.1
Putative manganese-dependent inorganic pyrophosphatase.
 
   
 0.832
CUP93163.1
DRTGG domain.
 
   
 0.832
CUP93183.1
PHP domain.
 
   
 0.832
hydA
Periplasmic [Fe] hydrogenase large subunit.
 
   
 0.824
cheV
Chemotaxis protein CheV.
   
 0.815
Your Current Organism:
Anaerotruncus colihominis
NCBI taxonomy Id: 169435
Other names: A. colihominis, Anaerotruncus colihominis Lawson et al. 2004, CCUG 45055, CIP 107754, DSM 17241, JCM 15631, Ruminococcus sp. 14565, WAL 14565
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