STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUP48314.1Nitrogenase molybdenum-cofactor biosynthesis protein NifN. (394 aa)    
Predicted Functional Partners:
nifH
Nitrogenase iron protein; Belongs to the NifH/BchL/ChlL family.
 
 0.991
bchB
Light-independent protochlorophyllide reductase subunit B.
 
     0.943
moaA_1
Molybdenum cofactor biosynthesis protein A.
 
  
 0.844
gsiA_3
Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
       0.773
gsiA_4
Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
       0.773
rubA
Rubredoxin.
   
 
 0.738
hbpA_1
Hemin-binding lipoprotein.
  
    0.711
CUP48367.1
Uncharacterised protein.
       0.658
mopII
Molybdenum-pterin-binding protein II.
  
   
 0.648
modA
Molybdate-binding periplasmic protein precursor.
 
  
 0.548
Your Current Organism:
Anaerotruncus colihominis
NCBI taxonomy Id: 169435
Other names: A. colihominis, Anaerotruncus colihominis Lawson et al. 2004, CCUG 45055, CIP 107754, DSM 17241, JCM 15631, Ruminococcus sp. 14565, WAL 14565
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