STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fliGFlagellar motor switch protein FliG. (336 aa)    
Predicted Functional Partners:
fliF
Flagellar M-ring protein.
 
 0.999
fliM
Flagellar motor switch protein FliM.
 0.999
fliN
Flagellar motor switch protein FliN.
 
 0.999
yscN
Probable ATP synthase YscN.
 
 0.998
CUP51635.1
Flagellar assembly protein H.
  
 
 0.995
flgG_1
Distal rod protein.
 
  
 0.995
flgC
Putative proximal rod protein; Belongs to the flagella basal body rod proteins family.
 
  
 0.994
fliE
Flagellar hook-basal body protein FliE.
 
 
 0.993
flgK
Flagellar hook-associated protein 1.
 
  
 0.992
flhB
Flagellar biosynthetic protein flhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.
 
 
 0.991
Your Current Organism:
Anaerotruncus colihominis
NCBI taxonomy Id: 169435
Other names: A. colihominis, Anaerotruncus colihominis Lawson et al. 2004, CCUG 45055, CIP 107754, DSM 17241, JCM 15631, Ruminococcus sp. 14565, WAL 14565
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.