STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUP58061.1Major membrane immunogen%2C membrane-anchored lipoprotein. (438 aa)    
Predicted Functional Partners:
CUP93201.1
Uncharacterized protein conserved in bacteria.
 
 
   0.772
CUP75261.1
Heptaprenyl diphosphate synthase component I.
 
     0.557
apbE
Thiamine biosynthesis lipoprotein ApbE precursor; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
 
   
 0.484
CUP89293.1
Uncharacterized protein conserved in bacteria.
  
     0.455
mviM
Virulence factor mviM homolog.
 
     0.446
CUP58035.1
Uncharacterised protein.
       0.432
CUP48393.1
Type I phosphodiesterase / nucleotide pyrophosphatase.
  
     0.414
Your Current Organism:
Anaerotruncus colihominis
NCBI taxonomy Id: 169435
Other names: A. colihominis, Anaerotruncus colihominis Lawson et al. 2004, CCUG 45055, CIP 107754, DSM 17241, JCM 15631, Ruminococcus sp. 14565, WAL 14565
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