STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUP61667.1Phosphoribosylaminoimidazole carboxylase%2C catalytic subunit. (252 aa)    
Predicted Functional Partners:
CUP61698.1
tRNA-specific 2-thiouridylase MnmA.
  
 0.996
CUP61651.1
Protein of uncharacterised function DUF111.
  
 0.995
CUP90841.1
Domain of uncharacterised function (DUF2088).
 
  
 0.948
cbiM
Energy-coupling factor transporter probable substrate-capture protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
  
    0.824
CUP61721.1
Domain of uncharacterised function (DUF3842).
       0.517
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
     
 0.472
yfaY
CinA-like protein; Belongs to the CinA family.
       0.430
ygaD
Competence damage-inducible protein A; Belongs to the CinA family.
       0.430
CUP27947.1
Ferredoxin II.
 
     0.428
Your Current Organism:
Anaerotruncus colihominis
NCBI taxonomy Id: 169435
Other names: A. colihominis, Anaerotruncus colihominis Lawson et al. 2004, CCUG 45055, CIP 107754, DSM 17241, JCM 15631, Ruminococcus sp. 14565, WAL 14565
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.