STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUP72090.1Uncharacterised protein. (87 aa)    
Predicted Functional Partners:
CUP72066.1
Uncharacterised protein.
      0.942
CUP72042.1
Uncharacterised protein.
       0.791
CUP72119.1
Uncharacterised protein.
       0.774
CUP72136.1
Uncharacterised protein.
       0.717
CUP72161.1
Uncharacterised protein.
       0.717
CUP72185.1
Uncharacterised protein.
       0.716
CUP72207.1
Uncharacterised protein.
       0.706
CUP72235.1
Suppressor of fused protein (SUFU).
       0.582
CUP72268.1
Uncharacterised protein.
       0.534
CUP72292.1
Uncharacterised protein.
       0.534
Your Current Organism:
Anaerotruncus colihominis
NCBI taxonomy Id: 169435
Other names: A. colihominis, Anaerotruncus colihominis Lawson et al. 2004, CCUG 45055, CIP 107754, DSM 17241, JCM 15631, Ruminococcus sp. 14565, WAL 14565
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.