STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUP80178.1Uncharacterized protein conserved in bacteria (DUF2313). (189 aa)    
Predicted Functional Partners:
CUP80145.1
Protein of uncharacterised function (DUF2634).
 
 
 0.985
CUP79984.1
Phage tail sheath protein.
 
   0.963
CUP80164.1
Uncharacterized homolog of phage Mu protein gp47.
 
    0.957
CUP80106.1
Phage protein D.
 
     0.953
CUP80084.1
LysM domain/BON superfamily protein.
 
    0.950
CUP80064.1
Tape measure domain.
 
    0.949
CUQ20646.1
Phage tail sheath protein.
 
   0.926
yqbN_1
Phage XkdN-like protein.
 
    0.922
xkdM_1
Phage-like element PBSX protein xkdM.
 
    0.917
CUP80202.1
Uncharacterised protein.
  
  
 0.902
Your Current Organism:
Anaerotruncus colihominis
NCBI taxonomy Id: 169435
Other names: A. colihominis, Anaerotruncus colihominis Lawson et al. 2004, CCUG 45055, CIP 107754, DSM 17241, JCM 15631, Ruminococcus sp. 14565, WAL 14565
Server load: low (18%) [HD]