STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUP87263.1ABC-type uncharacterized transport system%2C permease component; Belongs to the binding-protein-dependent transport system permease family. (351 aa)    
Predicted Functional Partners:
CUP87248.1
L-arabinose transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  0.971
lsrA_1
Autoinducer 2 import ATP-binding protein LsrA.
 
  0.968
tmpC_3
Purine nucleoside receptor A.
 
 
  0.950
CUP99390.1
Beta-methylgalactoside transporter inner membrane component; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.883
CUP21885.1
Inner membrane ABC transporter permease protein YjfF.
 
 
  0.880
CUP95603.1
L-arabinose transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.880
CUP95745.1
Beta-methylgalactoside transporter inner membrane component.
 
 
  0.880
CUP37013.1
ABC-type uncharacterized transport system%2C permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.879
CUP42292.1
ABC-type uncharacterized transport system%2C permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.879
mglA_8
Galactose/methyl galactoside import ATP-binding protein MglA.
 
 
  0.873
Your Current Organism:
Anaerotruncus colihominis
NCBI taxonomy Id: 169435
Other names: A. colihominis, Anaerotruncus colihominis Lawson et al. 2004, CCUG 45055, CIP 107754, DSM 17241, JCM 15631, Ruminococcus sp. 14565, WAL 14565
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.