STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gdhANADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (445 aa)    
Predicted Functional Partners:
preA_2
NAD-dependent dihydropyrimidine dehydrogenase subunit PreA.
  
 0.966
gltB_1
Ferredoxin-dependent glutamate synthase 1; Belongs to the glutamate synthase family.
  
 0.959
gltB_2
Ferredoxin-dependent glutamate synthase 1; Belongs to the glutamate synthase family.
  
 0.959
porA_3
Pyruvate synthase subunit porA.
  
 
 0.957
CUQ08579.1
Glucosamine--fructose-6-phosphate aminotransferase.
  
 0.951
CUQ08625.1
Formylmethanofuran dehydrogenase subunit C.
  
 0.951
cobB_2
NAD-dependent deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily.
   
 0.946
cdr
Coenzyme A disulfide reductase.
  
 
 0.941
gltD_1
Glutamate synthase [NADPH] small chain.
  
 0.931
gltD_2
Glutamate synthase [NADPH] small chain.
  
 0.931
Your Current Organism:
Anaerotruncus colihominis
NCBI taxonomy Id: 169435
Other names: A. colihominis, Anaerotruncus colihominis Lawson et al. 2004, CCUG 45055, CIP 107754, DSM 17241, JCM 15631, Ruminococcus sp. 14565, WAL 14565
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