STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUP97543.1Putative multidrug export ATP-binding/permease protein SAV1866. (580 aa)    
Predicted Functional Partners:
potA_2
Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
     
0.899
CUP97495.1
ABC-type cobalt transport system%2C permease component CbiQ and related transporters.
 
  
  0.863
bepR
HTH-type transcriptional repressor BepR.
 
     0.835
msbA_1
Lipid A export ATP-binding/permease protein MsbA.
 
    
0.832
CUP97521.1
Conserved hypothetical integral membrane protein.
 
     0.830
metN_2
Methionine import ATP-binding protein MetN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family.
 
     
0.787
ykoD_1
Putative HMP/thiamine import ATP-binding protein YkoD.
  
 
0.743
CUP26252.1
DNA-binding transcriptional repressor AcrR.
 
     0.711
ecfT_2
Energy-coupling factor transporter transmembrane protein EcfT.
  
  
  0.708
ecfA2
Energy-coupling factor transporter ATP-binding protein EcfA2; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
   
 
0.607
Your Current Organism:
Anaerotruncus colihominis
NCBI taxonomy Id: 169435
Other names: A. colihominis, Anaerotruncus colihominis Lawson et al. 2004, CCUG 45055, CIP 107754, DSM 17241, JCM 15631, Ruminococcus sp. 14565, WAL 14565
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