STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUP98084.1Uncharacterised protein. (305 aa)    
Predicted Functional Partners:
cssS
Sensor histidine kinase CssS.
  
     0.750
CUP97495.1
ABC-type cobalt transport system%2C permease component CbiQ and related transporters.
  
     0.721
CUP97521.1
Conserved hypothetical integral membrane protein.
  
     0.661
CUP22015.1
Uncharacterized protein related to capsule biosynthesis enzymes.
  
     0.602
CUP98257.1
CAAX prenyl protease-related protein.
 
     0.586
CUP97343.1
Thiol-disulfide oxidoreductase.
  
     0.564
msrAB
Peptide methionine sulfoxide reductase MsrA/MsrB.
 
     0.453
yycF_2
Transcriptional regulatory protein YycF.
  
     0.444
CUQ25894.1
Antirestriction protein (ArdA).
  
     0.439
ykoD_1
Putative HMP/thiamine import ATP-binding protein YkoD.
  
     0.438
Your Current Organism:
Anaerotruncus colihominis
NCBI taxonomy Id: 169435
Other names: A. colihominis, Anaerotruncus colihominis Lawson et al. 2004, CCUG 45055, CIP 107754, DSM 17241, JCM 15631, Ruminococcus sp. 14565, WAL 14565
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.