STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUQ05344.1comEA protein. (123 aa)    
Predicted Functional Partners:
CUP37581.1
ComEC family competence protein.
  
  
 0.851
CUP70110.1
Flp pilus assembly protein%2C protease CpaA.
   
  
 0.756
dgkA
Undecaprenol kinase.
    
  0.632
plsC
1-acyl-sn-glycerol-3-phosphate acyltransferase.
    
  0.614
yqfA
Hemolysin.
       0.592
CUP20519.1
Uncharacterised protein.
   
 
  0.590
CUP33264.1
DNA utilization protein GntX.
  
  
 0.545
yfaY
CinA-like protein; Belongs to the CinA family.
     
 0.524
ygaD
Competence damage-inducible protein A; Belongs to the CinA family.
     
 0.524
recA
Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
      
 0.512
Your Current Organism:
Anaerotruncus colihominis
NCBI taxonomy Id: 169435
Other names: A. colihominis, Anaerotruncus colihominis Lawson et al. 2004, CCUG 45055, CIP 107754, DSM 17241, JCM 15631, Ruminococcus sp. 14565, WAL 14565
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