STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
guaDGuanine deaminase. (426 aa)    
Predicted Functional Partners:
preA_2
NAD-dependent dihydropyrimidine dehydrogenase subunit PreA.
  
 
 0.923
ndhF_2
Nicotinate dehydrogenase FAD-subunit.
 
 
  0.909
hcrA_2
4-hydroxybenzoyl-CoA reductase subunit alpha.
 
 
  0.891
punA
Purine nucleoside phosphorylase 1; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
  
 
 0.869
gltD_1
Glutamate synthase [NADPH] small chain.
  
 
  0.807
mop
Aldehyde oxidoreductase.
 
 
 0.801
hcrA_1
4-hydroxybenzoyl-CoA reductase subunit alpha.
  
 
  0.792
cutS
Carbon monoxide dehydrogenase small chain.
  
 
  0.792
preA_1
NAD-dependent dihydropyrimidine dehydrogenase subunit PreA.
  
 
 0.742
hpt
Hypoxanthine-guanine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
    
 0.729
Your Current Organism:
Anaerotruncus colihominis
NCBI taxonomy Id: 169435
Other names: A. colihominis, Anaerotruncus colihominis Lawson et al. 2004, CCUG 45055, CIP 107754, DSM 17241, JCM 15631, Ruminococcus sp. 14565, WAL 14565
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