STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
artM_4Arginine transport ATP-binding protein ArtM. (248 aa)    
Predicted Functional Partners:
glnP_2
Glutamine transport system permease protein glnP.
 0.999
yecS
Inner membrane amino-acid ABC transporter permease protein yecS.
 0.999
artQ
Arginine transport system permease protein ArtQ.
 0.998
glnP_1
Glutamine transport system permease protein glnP.
 0.997
glnH
Glutamine-binding periplasmic protein precursor.
 
 0.993
fliY
Sulfate starvation-induced protein 7.
 
 0.945
artJ
ABC transporter arginine-binding protein 1 precursor.
 
 0.942
macB_1
Macrolide export ATP-binding/permease protein MacB.
 
      0.896
drrA
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
 
  
 
0.874
artP
Arginine-binding extracellular protein ArtP precursor.
 
 0.865
Your Current Organism:
Anaerotruncus colihominis
NCBI taxonomy Id: 169435
Other names: A. colihominis, Anaerotruncus colihominis Lawson et al. 2004, CCUG 45055, CIP 107754, DSM 17241, JCM 15631, Ruminococcus sp. 14565, WAL 14565
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