STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUQ19081.1Uncharacterised protein. (189 aa)    
Predicted Functional Partners:
CUQ19041.1
Phage major capsid protein E.
  
    0.839
CUQ18988.1
Phage portal protein%2C lambda family.
  
    0.798
CUQ19138.1
Phage tail sheath protein.
  
    0.789
CUQ19118.1
Uncharacterised protein.
       0.787
CUQ19097.1
Uncharacterised protein.
       0.786
CUQ19062.1
Uncharacterised protein.
       0.783
CUQ19020.1
Uncharacterised protein.
       0.733
CUQ19160.1
Phage major tail tube protein.
       0.733
CUQ18904.1
Uncharacterised protein.
  
    0.731
clpP1_2
ATP-dependent Clp protease proteolytic subunit 1.
  
    0.729
Your Current Organism:
Anaerotruncus colihominis
NCBI taxonomy Id: 169435
Other names: A. colihominis, Anaerotruncus colihominis Lawson et al. 2004, CCUG 45055, CIP 107754, DSM 17241, JCM 15631, Ruminococcus sp. 14565, WAL 14565
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.