Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AQR98278.1 | AQR98559.1 | CSACC_00160 | CSACC_03250 | Hypothetical protein. | Putative RNA polymerase sigma factor SigI. | 0.690 |
AQR98278.1 | AQR98673.1 | CSACC_00160 | CSACC_04660 | Hypothetical protein. | Endodeoxyribonuclease RusA. | 0.745 |
AQR98278.1 | AQR98901.1 | CSACC_00160 | CSACC_07030 | Hypothetical protein. | CYTH domain protein. | 0.706 |
AQR98278.1 | AQS02168.1 | CSACC_00160 | CSACC_40010 | Hypothetical protein. | Helix-turn-helix domain protein. | 0.733 |
AQR98278.1 | AQS02169.1 | CSACC_00160 | CSACC_40020 | Hypothetical protein. | Anaerobic benzoate catabolism transcriptional regulator. | 0.794 |
AQR98278.1 | MreD | CSACC_00160 | CSACC_06120 | Hypothetical protein. | Rod shape-determining protein MreD. | 0.651 |
AQR98278.1 | lhgO_1 | CSACC_00160 | CSACC_00150 | Hypothetical protein. | L-2-hydroxyglutarate oxidase LhgO. | 0.909 |
AQR98278.1 | niaR | CSACC_00160 | CSACC_00140 | Hypothetical protein. | Putative transcription repressor NiaR. | 0.804 |
AQR98278.1 | rny_1 | CSACC_00160 | CSACC_00130 | Hypothetical protein. | Ribonuclease Y. | 0.657 |
AQR98278.1 | secE | CSACC_00160 | CSACC_01880 | Hypothetical protein. | Protein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. | 0.673 |
AQR98559.1 | AQR98278.1 | CSACC_03250 | CSACC_00160 | Putative RNA polymerase sigma factor SigI. | Hypothetical protein. | 0.690 |
AQR98559.1 | AQR98673.1 | CSACC_03250 | CSACC_04660 | Putative RNA polymerase sigma factor SigI. | Endodeoxyribonuclease RusA. | 0.715 |
AQR98559.1 | AQR98901.1 | CSACC_03250 | CSACC_07030 | Putative RNA polymerase sigma factor SigI. | CYTH domain protein. | 0.746 |
AQR98559.1 | AQS02168.1 | CSACC_03250 | CSACC_40010 | Putative RNA polymerase sigma factor SigI. | Helix-turn-helix domain protein. | 0.780 |
AQR98559.1 | AQS02169.1 | CSACC_03250 | CSACC_40020 | Putative RNA polymerase sigma factor SigI. | Anaerobic benzoate catabolism transcriptional regulator. | 0.779 |
AQR98559.1 | MreD | CSACC_03250 | CSACC_06120 | Putative RNA polymerase sigma factor SigI. | Rod shape-determining protein MreD. | 0.755 |
AQR98559.1 | secE | CSACC_03250 | CSACC_01880 | Putative RNA polymerase sigma factor SigI. | Protein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. | 0.768 |
AQR98673.1 | AQR98278.1 | CSACC_04660 | CSACC_00160 | Endodeoxyribonuclease RusA. | Hypothetical protein. | 0.745 |
AQR98673.1 | AQR98559.1 | CSACC_04660 | CSACC_03250 | Endodeoxyribonuclease RusA. | Putative RNA polymerase sigma factor SigI. | 0.715 |
AQR98673.1 | AQR98901.1 | CSACC_04660 | CSACC_07030 | Endodeoxyribonuclease RusA. | CYTH domain protein. | 0.754 |
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