Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AQR98377.1 | YabQ | CSACC_01200 | CSACC_01220 | Ribosome-associated heat shock protein Hsp15. | Spore cortex protein YabQ. | 0.776 |
AQR98377.1 | hup | CSACC_01200 | CSACC_01190 | Ribosome-associated heat shock protein Hsp15. | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.886 |
AQR98377.1 | mazG | CSACC_01200 | CSACC_01180 | Ribosome-associated heat shock protein Hsp15. | Nucleoside triphosphate pyrophosphohydrolase. | 0.749 |
AQR98377.1 | spoVB_1 | CSACC_01200 | CSACC_01170 | Ribosome-associated heat shock protein Hsp15. | Stage V sporulation protein B. | 0.686 |
AQR98377.1 | spoVT_1 | CSACC_01200 | CSACC_01160 | Ribosome-associated heat shock protein Hsp15. | Stage V sporulation protein T. | 0.517 |
AQR98377.1 | yabP | CSACC_01200 | CSACC_01210 | Ribosome-associated heat shock protein Hsp15. | Spore protein YabP. | 0.750 |
AQR99514.1 | spoVB_1 | CSACC_13230 | CSACC_01170 | Hypothetical protein; Belongs to the UPF0297 family. | Stage V sporulation protein B. | 0.697 |
AQR99514.1 | trmK | CSACC_13230 | CSACC_11020 | Hypothetical protein; Belongs to the UPF0297 family. | tRNA (adenine(22)-N(1))-methyltransferase. | 0.762 |
YabQ | AQR98377.1 | CSACC_01220 | CSACC_01200 | Spore cortex protein YabQ. | Ribosome-associated heat shock protein Hsp15. | 0.776 |
YabQ | hup | CSACC_01220 | CSACC_01190 | Spore cortex protein YabQ. | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.787 |
YabQ | mazG | CSACC_01220 | CSACC_01180 | Spore cortex protein YabQ. | Nucleoside triphosphate pyrophosphohydrolase. | 0.526 |
YabQ | spoVB_1 | CSACC_01220 | CSACC_01170 | Spore cortex protein YabQ. | Stage V sporulation protein B. | 0.670 |
YabQ | spoVT_1 | CSACC_01220 | CSACC_01160 | Spore cortex protein YabQ. | Stage V sporulation protein T. | 0.477 |
YabQ | yabP | CSACC_01220 | CSACC_01210 | Spore cortex protein YabQ. | Spore protein YabP. | 0.965 |
cggR | spoVB_1 | CSACC_40210 | CSACC_01170 | Central glycolytic protein regulator. | Stage V sporulation protein B. | 0.503 |
hup | AQR98377.1 | CSACC_01190 | CSACC_01200 | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Ribosome-associated heat shock protein Hsp15. | 0.886 |
hup | YabQ | CSACC_01190 | CSACC_01220 | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Spore cortex protein YabQ. | 0.787 |
hup | mazG | CSACC_01190 | CSACC_01180 | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Nucleoside triphosphate pyrophosphohydrolase. | 0.645 |
hup | spoVB_1 | CSACC_01190 | CSACC_01170 | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Stage V sporulation protein B. | 0.622 |
hup | spoVT_1 | CSACC_01190 | CSACC_01160 | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Stage V sporulation protein T. | 0.550 |
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