Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AQR98377.1 | YabQ | CSACC_01200 | CSACC_01220 | Ribosome-associated heat shock protein Hsp15. | Spore cortex protein YabQ. | 0.776 |
| AQR98377.1 | hup | CSACC_01200 | CSACC_01190 | Ribosome-associated heat shock protein Hsp15. | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.886 |
| AQR98377.1 | mazG | CSACC_01200 | CSACC_01180 | Ribosome-associated heat shock protein Hsp15. | Nucleoside triphosphate pyrophosphohydrolase. | 0.749 |
| AQR98377.1 | pheA | CSACC_01200 | CSACC_06820 | Ribosome-associated heat shock protein Hsp15. | P-protein. | 0.445 |
| AQR98377.1 | yabP | CSACC_01200 | CSACC_01210 | Ribosome-associated heat shock protein Hsp15. | Spore protein YabP. | 0.750 |
| YabQ | AQR98377.1 | CSACC_01220 | CSACC_01200 | Spore cortex protein YabQ. | Ribosome-associated heat shock protein Hsp15. | 0.776 |
| YabQ | hup | CSACC_01220 | CSACC_01190 | Spore cortex protein YabQ. | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.787 |
| YabQ | mazG | CSACC_01220 | CSACC_01180 | Spore cortex protein YabQ. | Nucleoside triphosphate pyrophosphohydrolase. | 0.526 |
| YabQ | yabP | CSACC_01220 | CSACC_01210 | Spore cortex protein YabQ. | Spore protein YabP. | 0.965 |
| dnaA_1 | hup | CSACC_00010 | CSACC_01190 | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.687 |
| hup | AQR98377.1 | CSACC_01190 | CSACC_01200 | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Ribosome-associated heat shock protein Hsp15. | 0.886 |
| hup | YabQ | CSACC_01190 | CSACC_01220 | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Spore cortex protein YabQ. | 0.787 |
| hup | dnaA_1 | CSACC_01190 | CSACC_00010 | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | 0.687 |
| hup | iscR | CSACC_01190 | CSACC_36030 | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | HTH-type transcriptional regulator IscR. | 0.672 |
| hup | mazG | CSACC_01190 | CSACC_01180 | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Nucleoside triphosphate pyrophosphohydrolase. | 0.645 |
| hup | nusA | CSACC_01190 | CSACC_14330 | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Hypothetical protein; Participates in both transcription termination and antitermination. | 0.698 |
| hup | pheA | CSACC_01190 | CSACC_06820 | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | P-protein. | 0.760 |
| hup | rpsO | CSACC_01190 | CSACC_14410 | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.662 |
| hup | rpsT | CSACC_01190 | CSACC_10680 | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.728 |
| hup | yabP | CSACC_01190 | CSACC_01210 | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Spore protein YabP. | 0.661 |
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