STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR98570.1Hypothetical protein. (223 aa)    
Predicted Functional Partners:
AQS00221.1
Hypothetical protein.
  
     0.453
AQR98571.1
Hypothetical protein.
       0.449
xynC
Glucuronoxylanase XynC precursor.
  
     0.422
AQR98572.1
Hypothetical protein.
       0.416
AQR98567.1
FtsX-like permease family protein.
  
    0.410
AQR98568.1
FtsX-like permease family protein.
  
    0.410
bceA
Bacitracin export ATP-binding protein BceA.
       0.407
agrB_2
Accessory protein regulator protein B.
  
     0.400
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.