Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
lutR_1HTH-type transcriptional regulator LutR. (230 aa)    
Predicted Functional Partners:
glcA
Glycolate permease GlcA; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
 
  
 0.667
yvoA
HTH-type transcriptional repressor YvoA.
  
  
 0.653
rssA
Hypothetical protein.
       0.548
treR
Trehalose operon transcriptional repressor.
  
  
0.548
puuR_2
HTH-type transcriptional regulator PuuR.
 
  
 0.540
accD
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.
  
  
 0.528
barA_1
Signal transduction histidine-protein kinase BarA.
  
  
 0.493
marA_1
Multiple antibiotic resistance protein MarA.
 
  
 0.484
lutR_2
HTH-type transcriptional regulator LutR.
 
  
0.481
mcbR
HTH-type transcriptional regulator McbR.
 
  
0.474
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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