Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
adhE_2Aldehyde-alcohol dehydrogenase; This enzyme has activity using butanol and ethanol as substrates. (388 aa)    
Predicted Functional Partners:
adhE_4
Aldehyde-alcohol dehydrogenase.
 
 0.976
adhE_5
Aldehyde-alcohol dehydrogenase.
 
 0.974
mmgB
Putative 3-hydroxybutyryl-CoA dehydrogenase.
  
  
 0.586
alkA
DNA-3-methyladenine glycosylase.
  
    0.586
nifJ_1
Pyruvate-flavodoxin oxidoreductase.
  
  
 0.583
nifJ_2
Pyruvate-flavodoxin oxidoreductase.
  
  
 0.583
alkH
Aldehyde dehydrogenase.
  
 
 0.541
glgA
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
    0.491
acrB_2
acryloyl-CoA reductase electron transfer subunit gamma.
  
  
 0.447
gapN_1
NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.422
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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