STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adhE_2Aldehyde-alcohol dehydrogenase; This enzyme has activity using butanol and ethanol as substrates. (388 aa)    
Predicted Functional Partners:
adhE_4
Aldehyde-alcohol dehydrogenase.
 
 0.984
adhE_5
Aldehyde-alcohol dehydrogenase.
 
 0.984
mmgB
Putative 3-hydroxybutyryl-CoA dehydrogenase.
  
  
 0.753
nifJ_1
Pyruvate-flavodoxin oxidoreductase.
  
  
 0.660
nifJ_2
Pyruvate-flavodoxin oxidoreductase.
  
  
 0.660
acrB_2
acryloyl-CoA reductase electron transfer subunit gamma.
  
  
 0.627
adc
Acetoacetate decarboxylase; Catalyzes the conversion of acetoacetate to acetone and carbon dioxide; Belongs to the ADC family.
      
 0.605
acrA_2
acryloyl-CoA reductase electron transfer subunit beta; May play a role in a redox process; Belongs to the ETF alpha-subunit/FixB family.
     
 0.604
pflB_1
Formate acetyltransferase.
  
  
 0.561
alkA
DNA-3-methyladenine glycosylase.
  
    0.555
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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