STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HsdMPutative type I restriction enzymeP M protein. (518 aa)    
Predicted Functional Partners:
hsdR_1
Type-1 restriction enzyme R protein.
 
 
 0.993
AQR98653.1
EcoKI restriction-modification system protein HsdS.
 
 0.993
hsdS
Type-1 restriction enzyme EcoKI specificity protein.
 
 0.991
AQR98655.1
EcoKI restriction-modification system protein HsdS.
 
 
 0.978
hsdR_3
Type I restriction enzyme R protein; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
 
 0.970
hsdR_2
Type-1 restriction enzyme R protein.
 
 
 0.955
AQR99093.1
EcoKI restriction-modification system protein HsdS.
 
 0.949
xerC_1
Tyrosine recombinase XerC; Belongs to the 'phage' integrase family.
 
   
 0.769
prmC_2
Release factor glutamine methyltransferase.
  
     0.743
uvrB_1
UvrABC system protein B.
 
   
 0.599
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.