STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR98672.1Multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1. (192 aa)    
Predicted Functional Partners:
AQR98673.1
Endodeoxyribonuclease RusA.
 
     0.746
celS
Endoglucanase S precursor; Belongs to the glycosyl hydrolase 12 (cellulase H) family.
  
 
 0.653
pehX
Exo-poly-alpha-D-galacturonosidase precursor; Belongs to the glycosyl hydrolase 28 family.
  
 
 0.643
AQR98984.1
Hypothetical protein.
  
 
 0.627
AQS00634.1
Hypothetical protein.
  
 
 0.627
AQS01675.1
Hypothetical protein.
  
 
 0.627
AQS01809.1
Ribonuclease.
  
 
 0.627
lytA_19
Autolysin.
 
   0.615
TMP
Phage-related minor tail protein.
   
   0.606
AQR98334.1
Hypothetical protein.
 
   0.602
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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