Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AQR98751.1 | apbE_1 | CSACC_05510 | CSACC_05580 | SoxR reducing system protein RseC. | Thiamine biosynthesis lipoprotein ApbE precursor; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.609 |
| AQR98751.1 | rnfC | CSACC_05510 | CSACC_05520 | SoxR reducing system protein RseC. | Electron transport complex subunit RnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily. | 0.884 |
| AQR98751.1 | rnfE | CSACC_05510 | CSACC_05550 | SoxR reducing system protein RseC. | Electron transport complex subunit RnfE; Belongs to the NqrDE/RnfAE family. | 0.852 |
| AQR98751.1 | rsxA | CSACC_05510 | CSACC_05560 | SoxR reducing system protein RseC. | Electron transport complex subunit RsxA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.843 |
| AQR98751.1 | rsxB_1 | CSACC_05510 | CSACC_05570 | SoxR reducing system protein RseC. | Electron transport complex subunit RsxB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | 0.911 |
| AQR98751.1 | rsxD | CSACC_05510 | CSACC_05530 | SoxR reducing system protein RseC. | Electron transport complex subunit RsxD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family. | 0.882 |
| AQR98751.1 | rsxG | CSACC_05510 | CSACC_05540 | SoxR reducing system protein RseC. | Electron transport complex subunit RsxG; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family. | 0.910 |
| apbE_1 | AQR98751.1 | CSACC_05580 | CSACC_05510 | Thiamine biosynthesis lipoprotein ApbE precursor; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | SoxR reducing system protein RseC. | 0.609 |
| apbE_1 | nifJ_1 | CSACC_05580 | CSACC_22230 | Thiamine biosynthesis lipoprotein ApbE precursor; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Pyruvate-flavodoxin oxidoreductase. | 0.453 |
| apbE_1 | nifJ_2 | CSACC_05580 | CSACC_39670 | Thiamine biosynthesis lipoprotein ApbE precursor; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Pyruvate-flavodoxin oxidoreductase. | 0.453 |
| apbE_1 | rnfC | CSACC_05580 | CSACC_05520 | Thiamine biosynthesis lipoprotein ApbE precursor; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Electron transport complex subunit RnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily. | 0.829 |
| apbE_1 | rnfE | CSACC_05580 | CSACC_05550 | Thiamine biosynthesis lipoprotein ApbE precursor; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Electron transport complex subunit RnfE; Belongs to the NqrDE/RnfAE family. | 0.855 |
| apbE_1 | rsxA | CSACC_05580 | CSACC_05560 | Thiamine biosynthesis lipoprotein ApbE precursor; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Electron transport complex subunit RsxA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.856 |
| apbE_1 | rsxB_1 | CSACC_05580 | CSACC_05570 | Thiamine biosynthesis lipoprotein ApbE precursor; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Electron transport complex subunit RsxB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | 0.817 |
| apbE_1 | rsxD | CSACC_05580 | CSACC_05530 | Thiamine biosynthesis lipoprotein ApbE precursor; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Electron transport complex subunit RsxD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family. | 0.872 |
| apbE_1 | rsxG | CSACC_05580 | CSACC_05540 | Thiamine biosynthesis lipoprotein ApbE precursor; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Electron transport complex subunit RsxG; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family. | 0.833 |
| nifJ_1 | apbE_1 | CSACC_22230 | CSACC_05580 | Pyruvate-flavodoxin oxidoreductase. | Thiamine biosynthesis lipoprotein ApbE precursor; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.453 |
| nifJ_1 | nifJ_2 | CSACC_22230 | CSACC_39670 | Pyruvate-flavodoxin oxidoreductase. | Pyruvate-flavodoxin oxidoreductase. | 0.999 |
| nifJ_1 | pdg | CSACC_22230 | CSACC_40280 | Pyruvate-flavodoxin oxidoreductase. | Ultraviolet N-glycosylase/AP lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.536 |
| nifJ_1 | rnfC | CSACC_22230 | CSACC_05520 | Pyruvate-flavodoxin oxidoreductase. | Electron transport complex subunit RnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily. | 0.908 |
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