STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR98771.1Sensory histidine kinase DcuS. (416 aa)    
Predicted Functional Partners:
dpiB
Sensor histidine kinase DpiB.
  
  
  0.962
agrA
Accessory protein regulator protein A.
 
 
 0.955
Cfg
Putative AgrB-like protein.
 
  
  0.935
citS
Sensor protein CitS.
  
  
0.927
agrB_2
Accessory protein regulator protein B.
 
  
  0.920
cusS
Sensor kinase CusS.
  
  
  0.917
agrB_1
Accessory protein regulator protein B.
    
  0.904
AQR98888.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
  
 
0.903
dcuR
Transcriptional regulatory protein DcuR.
 
 
 0.898
lytR_2
Sensory transduction protein LytR.
 
  
 0.834
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.