STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR98853.1Putative transposase. (179 aa)    
Predicted Functional Partners:
AQR98851.1
Phage integrase family protein.
 
     0.482
AQR98852.1
Hypothetical protein.
       0.456
AQR98661.1
Divergent AAA domain protein.
  
     0.453
AQS01233.1
Transposase DDE domain protein.
  
     0.445
AQR99095.1
Transposase DDE domain protein.
  
     0.442
AQS00279.1
Transposase DDE domain protein.
  
     0.442
AQS00918.1
Transposase DDE domain protein.
  
     0.442
AQS01340.1
Transposase DDE domain protein.
  
     0.442
AQS01806.1
Transposase DDE domain protein.
  
     0.442
AQR99738.1
Transposase DDE domain protein.
  
     0.441
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.