Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AQR98926.1Subtilase family protein. (571 aa)    
Predicted Functional Partners:
AQR98925.1
Subtilase family protein.
 
    
0.815
AQS01211.1
Putative peptidoglycan binding domain protein.
 
     0.780
ssb
Single-stranded DNA-binding protein.
  
     0.633
AQS00921.1
Small, acid-soluble spore protein, alpha/beta type.
  
     0.571
AQR99898.1
Hypothetical protein.
  
     0.564
AQR98689.1
LysM domain protein.
  
     0.551
prsA
Foldase protein PrsA precursor.
   
 
 0.533
cbf2
Putative peptidyl-prolyl cis-trans isomerase Cbf2 precursor.
   
 
 0.533
cotI_2
Spore coat protein I.
  
     0.492
cotI_3
Spore coat protein I.
  
     0.459
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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