STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yjfFInner membrane ABC transporter permease protein YjfF; Belongs to the binding-protein-dependent transport system permease family. (334 aa)    
Predicted Functional Partners:
araG
Arabinose import ATP-binding protein AraG.
 0.998
ytfT
Inner membrane ABC transporter permease protein YtfT; Belongs to the binding-protein-dependent transport system permease family.
 
  
 
0.988
ytfQ
ABC transporter periplasmic-binding protein YtfQ precursor.
 
 0.974
rbsB_1
D-ribose-binding periplasmic protein precursor.
 0.973
rbsA_2
Ribose import ATP-binding protein RbsA.
 
 0.879
rbsA_1
Ribose import ATP-binding protein RbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.876
mglB_7
D-galactose-binding periplasmic protein precursor.
 
 0.875
lsrA
Autoinducer 2 import ATP-binding protein LsrA.
 
 0.864
mglB_5
D-galactose-binding periplasmic protein precursor.
 
 
 0.860
rbsB_2
D-ribose-binding periplasmic protein precursor.
 
 0.850
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.