STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
araAL-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. (488 aa)    
Predicted Functional Partners:
ulaF_2
L-ribulose-5-phosphate 4-epimerase UlaF.
 
 
 0.990
ulaF_1
L-ribulose-5-phosphate 4-epimerase UlaF.
 
 
 0.981
fucA_2
L-fuculose phosphate aldolase.
 
 
 0.964
xynD_2
Arabinoxylan arabinofuranohydrolase precursor; Belongs to the glycosyl hydrolase 43 family.
 
 
 0.906
xynD_1
Arabinoxylan arabinofuranohydrolase precursor.
 
 
 0.895
fucK
L-fuculokinase.
 
  
 0.860
fucA_1
L-fuculose phosphate aldolase.
 
  
 0.783
xylB
Xylulose kinase.
  
  
 0.716
AQS01414.1
Extracellular exo-alpha-L-arabinofuranosidase precursor.
 
  
 0.715
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
  
  
 0.621
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.