STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fucKL-fuculokinase. (534 aa)    
Predicted Functional Partners:
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
  
 0.860
ulaF_2
L-ribulose-5-phosphate 4-epimerase UlaF.
 
  
 0.803
ulaF_1
L-ribulose-5-phosphate 4-epimerase UlaF.
 
  
 0.800
AQS01453.1
Hypothetical protein; L-fucose isomerase, C-terminal domain.
 
  
 0.715
csbC_2
Putative metabolite transport protein CsbC; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
 
  
 0.684
fucA_2
L-fuculose phosphate aldolase.
 
  
 0.680
araR
Arabinose metabolism transcriptional repressor.
 
 
 
 0.676
ptsH
Phosphocarrier protein HPr.
    
 
 0.605
fucA_1
L-fuculose phosphate aldolase.
 
  
 0.603
fruA_3
PTS system fructose-specific EIIABC component.
     
 0.573
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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