STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR98984.1Hypothetical protein. (269 aa)    
Predicted Functional Partners:
AQS01336.1
Hypothetical protein.
 
 
   0.759
AQR98985.1
Hypothetical protein.
       0.752
AQR98971.1
Hypothetical protein.
 
   
 0.751
AQR98973.1
Hypothetical protein.
 
   
 0.751
AQR98996.1
Hypothetical protein.
  
  
 0.743
AQR99007.1
Hypothetical protein.
  
     0.739
AQR99020.1
Phage late control protein Gpd.
  
     0.736
AQR98998.1
Hypothetical protein.
  
    0.735
AQR99003.1
Hypothetical protein.
  
     0.734
AQR99019.1
Hypothetical protein.
  
     0.734
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.