STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR99007.1Hypothetical protein. (119 aa)    
Predicted Functional Partners:
toxA_1
Toxin A.
 
     0.911
AQR98998.1
Hypothetical protein.
 
 
 
 0.816
AQR99003.1
Hypothetical protein.
 
     0.816
AQR98996.1
Hypothetical protein.
 
     0.802
AQR98971.1
Hypothetical protein.
  
   
 0.777
AQR98973.1
Hypothetical protein.
  
   
 0.777
AQR99019.1
Hypothetical protein.
 
     0.776
AQS01342.1
Hypothetical protein.
 
     0.776
AQR99020.1
Phage late control protein Gpd.
  
     0.774
AQS01819.1
Phage late control protein Gpd.
  
     0.774
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.